SNP Detail For rs2074038
1.Mapping Information
Human SNP ID rs2074038
Human chromosome chr11
Human SNP position 44066439
Pig chromosome chr2
Pig SNP position 19876964
2.Annotation Information
PubMed ID26028593
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26028593
StudyIdentification of new susceptibility loci for IgA nephropathy in Han Chinese.
Disease/TraitIgA nephropathy
Initial sample1,434 Han Chinese ancestry cases, 10,661 Han Chinese ancestry controls
Replication sample6,879 Han Chinese ancestry cases, 9,019 Han Chinese ancestry controls
Region11p11.2
Chromosome idchr11
Chromosome position44066439
Reported geneACCS
Mapped geneACCS
Upstream gene id
Downstream gene id
SNP gene ids84680
Upstream gene distance
Downstream gene distance
SNP risk allelers2074038-T
SNPsrs2074038
Merged
SNP id current2074038
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.288
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta1.136
%95 Ci[1.089-1.185]
PlatformIllumina [3792949] (imputed)
CNVN
Mapped traitIGA glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004194
Study accessionGCST002943