Human SNP ID | rs2074038 |
---|---|
Human chromosome | chr11 |
Human SNP position | 44066439 |
Pig chromosome | chr2 |
Pig SNP position | 19876964 |
PubMed ID | 26028593 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26028593 |
Study | Identification of new susceptibility loci for IgA nephropathy in Han Chinese. |
Disease/Trait | IgA nephropathy |
Initial sample | 1,434 Han Chinese ancestry cases, 10,661 Han Chinese ancestry controls |
Replication sample | 6,879 Han Chinese ancestry cases, 9,019 Han Chinese ancestry controls |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 44066439 |
Reported gene | ACCS |
Mapped gene | ACCS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84680 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2074038-T |
SNPs | rs2074038 |
Merged | |
SNP id current | 2074038 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.288 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | 1.136 |
%95 Ci | [1.089-1.185] |
Platform | Illumina [3792949] (imputed) |
CNV | N |
Mapped trait | IGA glomerulonephritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004194 |
Study accession | GCST002943 |