Human SNP ID | rs2072413 |
---|---|
Human chromosome | chr7 |
Human SNP position | 150950881 |
Pig chromosome | chr18 |
Pig SNP position | 6725040 |
PubMed ID | 24952745 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24952745 |
Study | Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization. |
Disease/Trait | QT interval |
Initial sample | Up to 70,389 European ancestry individuals, up to 672 Orcadian individuals |
Replication sample | Up to 33,316 European ancestry individuals |
Region | 7q36.1 |
Chromosome id | chr7 |
Chromosome position | 150950881 |
Reported gene | KCNH2 |
Mapped gene | KCNH2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3757 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2072413-T |
SNPs | rs2072413 |
Merged | 0 |
SNP id current | 2072413 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.266 |
P value | 1E-49 |
Pvalue mlog | 49 |
P value text | |
Or beta | 1.68 |
%95 Ci | [1.46-1.9] unit decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST002500 |