Human SNP ID | rs2071699 |
---|---|
Human chromosome | chr19 |
Human SNP position | 48751247 |
Pig chromosome | chr6 |
Pig SNP position | 49827185 |
PubMed ID | 24941225 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24941225 |
Study | Genetic variations affecting serum carcinoembryonic antigen levels and status of regional lymph nodes in patients with sporadic colorectal cancer from Southern China. |
Disease/Trait | Elevated serum carcinoembryonic antigen levels |
Initial sample | 1,999 Chinese ancestry individuals |
Replication sample | NA |
Region | 19q13.33 |
Chromosome id | chr19 |
Chromosome position | 48751247 |
Reported gene | FUT1 |
Mapped gene | FUT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2523 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2071699-? |
SNPs | rs2071699 |
Merged | 0 |
SNP id current | 2071699 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [709211] (imputed) |
CNV | N |
Mapped trait | serum carcinoembryonic antigen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005760 |
Study accession | GCST002485 |