Human SNP ID | rs2068361 |
---|---|
Human chromosome | chr6 |
Human SNP position | 7736510 |
Pig chromosome | chr7 |
Pig SNP position | 5173147 |
PubMed ID | 22419666 |
---|---|
Journal | Am J Med Genet A |
Link | www.ncbi.nlm.nih.gov/pubmed/22419666 |
Study | Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts. |
Disease/Trait | Orofacial clefts |
Initial sample | 1,094 European ancestry triads, 1,277 Asian ancestry triads, 87 triads |
Replication sample | NA |
Region | 6p24.3 |
Chromosome id | chr6 |
Chromosome position | 7736510 |
Reported gene | BMP6 |
Mapped gene | BMP6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 654 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2068361-? |
SNPs | rs2068361 |
Merged | 0 |
SNP id current | 2068361 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (CL) |
Or beta | 1.64 |
%95 Ci | [1.32-2.04 |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | Orofacial clefting syndrome |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_139039 |
Study accession | GCST001442 |