SNP Detail For rs2066865
1.Mapping Information
Human SNP ID rs2066865
Human chromosome chr4
Human SNP position 154604124
Pig chromosome chr8
Pig SNP position 78859842
2.Annotation Information
PubMed ID25772935
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25772935
StudyMeta-analysis of 65,734 Individuals Identifies TSPAN15 and SLC44A2 as Two Susceptibility Loci for Venous Thromboembolism.
Disease/TraitVenous thromboembolism
Initial sample7,507 European ancestry cases, 52,632 European ancestry controls
Replication sample3,009 European ancestry cases, 2,586 European ancestry controls
Region4q32.1
Chromosome idchr4
Chromosome position154604124
Reported geneFGG
Mapped geneFGA - FGG
Upstream gene id2243
Downstream gene id2266
SNP gene ids
Upstream gene distance13379
Downstream gene distance10
SNP risk allelers2066865-A
SNPsrs2066865
Merged0
SNP id current2066865
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.244
P value0.0000000000000001
Pvalue mlog16
P value text
Or beta1.24
%95 Ci[1.18-1.31]
PlatformAffymetrix, Illumina [6751884] (imputed)
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST002808