Human SNP ID | rs2066865 |
---|---|
Human chromosome | chr4 |
Human SNP position | 154604124 |
Pig chromosome | chr8 |
Pig SNP position | 78859842 |
PubMed ID | 25772935 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25772935 |
Study | Meta-analysis of 65,734 Individuals Identifies TSPAN15 and SLC44A2 as Two Susceptibility Loci for Venous Thromboembolism. |
Disease/Trait | Venous thromboembolism |
Initial sample | 7,507 European ancestry cases, 52,632 European ancestry controls |
Replication sample | 3,009 European ancestry cases, 2,586 European ancestry controls |
Region | 4q32.1 |
Chromosome id | chr4 |
Chromosome position | 154604124 |
Reported gene | FGG |
Mapped gene | FGA - FGG |
Upstream gene id | 2243 |
Downstream gene id | 2266 |
SNP gene ids | |
Upstream gene distance | 13379 |
Downstream gene distance | 10 |
SNP risk allele | rs2066865-A |
SNPs | rs2066865 |
Merged | 0 |
SNP id current | 2066865 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.244 |
P value | 0.0000000000000001 |
Pvalue mlog | 16 |
P value text | |
Or beta | 1.24 |
%95 Ci | [1.18-1.31] |
Platform | Affymetrix, Illumina [6751884] (imputed) |
CNV | N |
Mapped trait | venous thromboembolism |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004286 |
Study accession | GCST002808 |