SNP Detail For rs2064197
1.Mapping Information
Human SNP ID rs2064197
Human chromosome chr6
Human SNP position 8998578
Pig chromosome chr7
Pig SNP position 6290122
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region6p24.3
Chromosome idchr6
Chromosome position8998578
Reported geneSLC35B3, TFAP2A
Mapped geneLOC105374914
Upstream gene id
Downstream gene id
SNP gene ids105374914
Upstream gene distance
Downstream gene distance
SNP risk allelers2064197-?
SNPsrs2064197
Merged0
SNP id current2064197
Contextintergenic_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text(SG)
Or beta0.19
%95 Ci[0.11-0.27] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitglucose homeostasis measurement, glucose effectiveness measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833
Study accessionGCST002726