Human SNP ID | rs2064197 |
---|---|
Human chromosome | chr6 |
Human SNP position | 8998578 |
Pig chromosome | chr7 |
Pig SNP position | 6290122 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 6p24.3 |
Chromosome id | chr6 |
Chromosome position | 8998578 |
Reported gene | SLC35B3, TFAP2A |
Mapped gene | LOC105374914 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105374914 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2064197-? |
SNPs | rs2064197 |
Merged | 0 |
SNP id current | 2064197 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (SG) |
Or beta | 0.19 |
%95 Ci | [0.11-0.27] unit decrease |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | glucose homeostasis measurement, glucose effectiveness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833 |
Study accession | GCST002726 |