SNP Detail For rs2063413
1.Mapping Information
Human SNP ID rs2063413
Human chromosome chr4
Human SNP position 4652630
Pig chromosome chr8
Pig SNP position 5453506
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment (interaction)
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region4p16.2 x 22q12.2
Chromosome idchr4 x 22
Chromosome position4652630 x 30276431
Reported geneNR x NR
Mapped geneSTX18-AS1 x OSM - GATSL3
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers2063413-? x rs877549-?
SNPsrs2063413 x rs877549
Merged
SNP id current
Contextintron_variant x non_coding_transcript_exon_variant
Intergenic
Allele frequencyNR
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta
%95 Ci
PlatformIllumina [629437] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002487