Human SNP ID | rs2056417 |
---|---|
Human chromosome | chr1 |
Human SNP position | 10521601 |
Pig chromosome | chr6 |
Pig SNP position | 64711607 |
PubMed ID | 23817569 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23817569 |
Study | A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. |
Disease/Trait | Self-reported allergy |
Initial sample | 53,862 European ancestry individuals |
Replication sample | NA |
Region | 1p36.22 |
Chromosome id | chr1 |
Chromosome position | 10521601 |
Reported gene | PEX14 |
Mapped gene | PEX14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5195 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2056417-A |
SNPs | rs2056417 |
Merged | 0 |
SNP id current | 2056417 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.3027 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.0658 |
%95 Ci | [0.041-0.091] unit decrease |
Platform | Illumina [2400000] (imputed) |
CNV | N |
Mapped trait | allergy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003785 |
Study accession | GCST002083 |