Human SNP ID | rs204993 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32187804 |
Pig chromosome | chr7 |
Pig SNP position | 28045360 |
PubMed ID | 21804548 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21804548 |
Study | Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population. |
Disease/Trait | Asthma |
Initial sample | 1,532 Japanese ancestry cases, 3,304 Japanese ancestry controls |
Replication sample | 5,639 Japanese ancestry cases, 24,608 Japanese ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32187804 |
Reported gene | PBX2 |
Mapped gene | PBX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5089 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs204993-A |
SNPs | rs204993 |
Merged | 0 |
SNP id current | 204993 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.000000000000002 |
Pvalue mlog | 14.698970004336 |
P value text | |
Or beta | 1.17 |
%95 Ci | [1.12-1.21] |
Platform | Illumina [458847] |
CNV | N |
Mapped trait | asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST001183 |