SNP Detail For rs2048485
1.Mapping Information
Human SNP ID rs2048485
Human chromosome chr18
Human SNP position 44510702
Pig chromosome chr1
Pig SNP position 103719098
2.Annotation Information
PubMed ID22885689
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22885689
StudyGenome-wide association study of multiplex schizophrenia pedigrees.
Disease/TraitSchizophrenia
Initial sample1,218 European ancestry cases, 990 European ancestry controls, 139 cases, 114 controls
Replication sampleNA
Region18q12.3
Chromosome idchr18
Chromosome position44510702
Reported geneintergenic
Mapped geneLINC01478
Upstream gene id
Downstream gene id
SNP gene ids101927921
Upstream gene distance
Downstream gene distance
SNP risk allelers2048485-?
SNPsrs2048485
Merged0
SNP id current2048485
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(EA)
Or beta1.4
%95 Ci[NR]
PlatformIllumina [up to 531195]
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST001657