Human SNP ID | rs2048485 |
---|---|
Human chromosome | chr18 |
Human SNP position | 44510702 |
Pig chromosome | chr1 |
Pig SNP position | 103719098 |
PubMed ID | 22885689 |
---|---|
Journal | Am J Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22885689 |
Study | Genome-wide association study of multiplex schizophrenia pedigrees. |
Disease/Trait | Schizophrenia |
Initial sample | 1,218 European ancestry cases, 990 European ancestry controls, 139 cases, 114 controls |
Replication sample | NA |
Region | 18q12.3 |
Chromosome id | chr18 |
Chromosome position | 44510702 |
Reported gene | intergenic |
Mapped gene | LINC01478 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927921 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2048485-? |
SNPs | rs2048485 |
Merged | 0 |
SNP id current | 2048485 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (EA) |
Or beta | 1.4 |
%95 Ci | [NR] |
Platform | Illumina [up to 531195] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST001657 |