SNP Detail For rs2046383
1.Mapping Information
Human SNP ID rs2046383
Human chromosome chr12
Human SNP position 29951209
Pig chromosome chr5
Pig SNP position 47035069
2.Annotation Information
PubMed ID20445134
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20445134
StudyAssociation of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium.
Disease/TraitHeart failure
Initial sample20,926 European ancestry individuals, 2,895 African ancestry individuals
Replication sampleNA
Region12p11.22
Chromosome idchr12
Chromosome position29951209
Reported geneTMTC1
Mapped geneLOC105369715
Upstream gene id
Downstream gene id
SNP gene ids105369715
Upstream gene distance
Downstream gene distance
SNP risk allelers2046383-?
SNPsrs2046383
Merged0
SNP id current2046383
Contextintergenic_variant
Intergenic0
Allele frequency0.3
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta1.39
%95 Ci[0.97-1.97]
PlatformAffymetrix, Illumina [2478304] (imputed)
CNVN
Mapped traitheart failure
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003144
Study accessionGCST000675