SNP Detail For rs2044029
1.Mapping Information
Human SNP ID rs2044029
Human chromosome chr15
Human SNP position 71387620
Pig chromosome chr1
Pig SNP position 187505525
2.Annotation Information
PubMed ID22837378
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22837378
StudyGenome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction.
Disease/TraitAirflow obstruction
Initial sampleup to 3,368 European ancestry cases, up to 29,507 European ancestry controls
Replication sample331 European ancestry cases, 2,550 European ancestry controls
Region15q23
Chromosome idchr15
Chromosome position71387620
Reported geneTHSD4
Mapped geneTHSD4
Upstream gene id
Downstream gene id
SNP gene ids79875
Upstream gene distance
Downstream gene distance
SNP risk allelers2044029-A
SNPsrs2044029
Merged0
SNP id current2044029
Contextintron_variant
Intergenic0
Allele frequency0.4
P value0.0000001
Pvalue mlog7
P value text(All)
Or beta1.17
%95 Ci[NR]
PlatformAffymetrix, Illumina [up to 2500000] (imputed)
CNVN
Mapped traitpulmonary function measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003892
Study accessionGCST001621