Human SNP ID | rs2040862 |
---|---|
Human chromosome | chr5 |
Human SNP position | 138084300 |
Pig chromosome | chr2 |
Pig SNP position | 145778119 |
PubMed ID | 22544366 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22544366 |
Study | Meta-analysis identifies six new susceptibility loci for atrial fibrillation. |
Disease/Trait | Atrial fibrillation |
Initial sample | 6,707 European ancestry cases, 52,426 European ancestry controls |
Replication sample | 5,381 European ancestry casses, 10,030 European ancestry controls |
Region | 5q31.2 |
Chromosome id | chr5 |
Chromosome position | 138084300 |
Reported gene | WNT8A |
Mapped gene | WNT8A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7478 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2040862-T |
SNPs | rs2040862 |
Merged | 0 |
SNP id current | 2040862 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 1.12 |
%95 Ci | [1.07-1.17] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | atrial fibrillation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000275 |
Study accession | GCST001499 |