SNP Detail For rs2040862
1.Mapping Information
Human SNP ID rs2040862
Human chromosome chr5
Human SNP position 138084300
Pig chromosome chr2
Pig SNP position 145778119
2.Annotation Information
PubMed ID22544366
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22544366
StudyMeta-analysis identifies six new susceptibility loci for atrial fibrillation.
Disease/TraitAtrial fibrillation
Initial sample6,707 European ancestry cases, 52,426 European ancestry controls
Replication sample5,381 European ancestry casses, 10,030 European ancestry controls
Region5q31.2
Chromosome idchr5
Chromosome position138084300
Reported geneWNT8A
Mapped geneWNT8A
Upstream gene id
Downstream gene id
SNP gene ids7478
Upstream gene distance
Downstream gene distance
SNP risk allelers2040862-T
SNPsrs2040862
Merged0
SNP id current2040862
Contextintron_variant
Intergenic0
Allele frequency0.18
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.12
%95 Ci[1.07-1.17]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitatrial fibrillation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000275
Study accessionGCST001499