Human SNP ID | rs2038823 |
---|---|
Human chromosome | chr13 |
Human SNP position | 96299179 |
Pig chromosome | chr11 |
Pig SNP position | 72718156 |
PubMed ID | 21310492 |
---|---|
Journal | Ophthalmology |
Link | www.ncbi.nlm.nih.gov/pubmed/21310492 |
Study | Genome-wide association study of diabetic retinopathy in a Taiwanese population. |
Disease/Trait | Diabetic retinopathy |
Initial sample | 174 Han Chinese ancestry Type 2 diabetes cases, 575 Han Chinese ancestry Type 2 diabetes controls, 100 Han Chinese ancestry non-diabetic controls |
Replication sample | NA |
Region | 13q32.1 |
Chromosome id | chr13 |
Chromosome position | 96299179 |
Reported gene | HS6ST3 |
Mapped gene | HS6ST3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 266722 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2038823-C |
SNPs | rs2038823 |
Merged | 0 |
SNP id current | 2038823 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000005 |
Pvalue mlog | 10.3010299956639 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 550000] |
CNV | N |
Mapped trait | diabetic retinopathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003770 |
Study accession | GCST000966 |