SNP Detail For rs2032224
1.Mapping Information
Human SNP ID rs2032224
Human chromosome chr18
Human SNP position 63509033
Pig chromosome chr1
Pig SNP position 175642602
2.Annotation Information
PubMed ID24025145
JournalBreast Cancer Res
Linkwww.ncbi.nlm.nih.gov/pubmed/24025145
StudyA genome-wide association study of chemotherapy-induced alopecia in breast cancer patients.
Disease/TraitAdverse response to chemotherapy in breast cancer (alopecia) (anti-microtubule)
Initial sample119 Japanese ancestry cases, 105 Japanese ancestry controls
Replication sampleNA
Region18q21.33
Chromosome idchr18
Chromosome position63509033
Reported geneSERPINB5
Mapped geneSERPINB5 - SERPINB12
Upstream gene id5268
Downstream gene id89777
SNP gene ids
Upstream gene distance3948
Downstream gene distance10057
SNP risk allelers2032224-A
SNPsrs2032224
Merged0
SNP id current2032224
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.62
P value0.000009
Pvalue mlog5.04575749056067
P value text(Recessive)
Or beta2.16
%95 Ci[1.42-3.27]
PlatformIllumina [555600]
CNVN
Mapped traitchemotherapy-induced alopecia, response to antimicrotubule agent
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005400, http://www.ebi.ac.uk/efo/EFO_0005260
Study accessionGCST002177