SNP Detail For rs2018293
1.Mapping Information
Human SNP ID rs2018293
Human chromosome chr22
Human SNP position 26308595
Pig chromosome chr14
Pig SNP position 46816160
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitVascular brain injury
Initial sampleup to 2,940 individuals
Replication sampleNA
Region22q12.1
Chromosome idchr22
Chromosome position26308595
Reported geneSEZ6L
Mapped geneSEZ6L
Upstream gene id
Downstream gene id
SNP gene ids23544
Upstream gene distance
Downstream gene distance
SNP risk allelers2018293-T
SNPsrs2018293
Merged0
SNP id current2018293
Contextintron_variant
Intergenic0
Allele frequency0.185
P value0.000008
Pvalue mlog5.09691001300805
P value text(Ordinal)
Or beta0.3091
%95 Ci[0.17-0.44] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitvascular brain injury measurement, vascular brain injury
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006800, http://www.ebi.ac.uk/efo/EFO_0006791
Study accessionGCST002590