Human SNP ID | rs2018293 |
---|---|
Human chromosome | chr22 |
Human SNP position | 26308595 |
Pig chromosome | chr14 |
Pig SNP position | 46816160 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Vascular brain injury |
Initial sample | up to 2,940 individuals |
Replication sample | NA |
Region | 22q12.1 |
Chromosome id | chr22 |
Chromosome position | 26308595 |
Reported gene | SEZ6L |
Mapped gene | SEZ6L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23544 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2018293-T |
SNPs | rs2018293 |
Merged | 0 |
SNP id current | 2018293 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.185 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Ordinal) |
Or beta | 0.3091 |
%95 Ci | [0.17-0.44] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | vascular brain injury measurement, vascular brain injury |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006800, http://www.ebi.ac.uk/efo/EFO_0006791 |
Study accession | GCST002590 |