SNP Detail For rs2016586
1.Mapping Information
Human SNP ID rs2016586
Human chromosome chr22
Human SNP position 35729217
Pig chromosome chr5
Pig SNP position 9678060
2.Annotation Information
PubMed ID24348519
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24348519
StudyEMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children.
Disease/TraitBody mass index
Initial sampleup to 2,860 European ancestry children
Replication sampleNA
Region22q12.3
Chromosome idchr22
Chromosome position35729217
Reported geneAPOL5
Mapped geneAPOL5
Upstream gene id
Downstream gene id
SNP gene ids80831
Upstream gene distance
Downstream gene distance
SNP risk allelers2016586-?
SNPsrs2016586
Merged0
SNP id current2016586
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta4.67
%95 Ci[NR] z score decrease
PlatformAffymetrix, Illumina [up to 583824] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002301