Human SNP ID | rs2016586 |
---|---|
Human chromosome | chr22 |
Human SNP position | 35729217 |
Pig chromosome | chr5 |
Pig SNP position | 9678060 |
PubMed ID | 24348519 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24348519 |
Study | EMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children. |
Disease/Trait | Body mass index |
Initial sample | up to 2,860 European ancestry children |
Replication sample | NA |
Region | 22q12.3 |
Chromosome id | chr22 |
Chromosome position | 35729217 |
Reported gene | APOL5 |
Mapped gene | APOL5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80831 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2016586-? |
SNPs | rs2016586 |
Merged | 0 |
SNP id current | 2016586 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 4.67 |
%95 Ci | [NR] z score decrease |
Platform | Affymetrix, Illumina [up to 583824] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002301 |