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SNP Detail For rs2016444
1.Mapping Information
| Human SNP ID | rs2016444 |
|---|---|
| Human chromosome | chr8 |
| Human SNP position | 13201165 |
| Pig chromosome | chr17 |
| Pig SNP position | 1158543 |
2.Annotation Information
| PubMed ID | 24315451 |
|---|---|
| Journal | J Allergy Clin Immunol |
| Link | www.ncbi.nlm.nih.gov/pubmed/24315451 |
| Study | Fraction of exhaled nitric oxide values in childhood are associated with 17q11.2-q12 and 17q12-q21 variants. |
| Disease/Trait | Fractional exhaled nitric oxide (childhood) |
| Initial sample | 5,131 European ancestry individuals, 1,155 Hispanic individuals, 2,572 individuals |
| Replication sample | NA |
| Region | 8p22 |
| Chromosome id | chr8 |
| Chromosome position | 13201165 |
| Reported gene | DLC1 |
| Mapped gene | DLC1 |
| Upstream gene id | |
| Downstream gene id | |
| SNP gene ids | 10395 |
| Upstream gene distance | |
| Downstream gene distance | |
| SNP risk allele | rs2016444-G |
| SNPs | rs2016444 |
| Merged | 0 |
| SNP id current | 2016444 |
| Context | intron_variant |
| Intergenic | 0 |
| Allele frequency | 0.09 |
| P value | 0.0000009 |
| Pvalue mlog | 6.04575749056067 |
| P value text | |
| Or beta | 0.13 |
| %95 Ci | [0.079-0.181] unit decrease |
| Platform | Affymetrix, Illumina [2253077] (imputed) |
| CNV | N |
| Mapped trait | nitric oxide exhalation measurement |
| Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005536 |
| Study accession | GCST002304 |
| PubMed ID | 24315451 |
| Journal | J Allergy Clin Immunol |
| Link | www.ncbi.nlm.nih.gov/pubmed/24315451 |
| Study | Fraction of exhaled nitric oxide values in childhood are associated with 17q11.2-q12 and 17q12-q21 variants. |
| Disease/Trait | Fractional exhaled nitric oxide (childhood) |
| Initial sample | 5,131 European ancestry individuals, 1,155 Hispanic individuals, 2,572 individuals |
| Replication sample | NA |
| Region | 8p22 |
| Chromosome id | chr8 |
| Chromosome position | 13201165 |
| Reported gene | DLC1 |
| Mapped gene | DLC1 |
| Upstream gene id | |
| Downstream gene id | |
| SNP gene ids | 10395 |
| Upstream gene distance | |
| Downstream gene distance | |
| SNP risk allele | rs2016444-G |
| SNPs | rs2016444 |
| Merged | 0 |
| SNP id current | 2016444 |
| Context | intron_variant |
| Intergenic | 0 |
| Allele frequency | 0.01 |
| P value | 0.000000000001 |
| Pvalue mlog | 12 |
| P value text | (EA) |
| Or beta | 0.292 |
| %95 Ci | [0.21-0.37] unit decrease |
| Platform | Affymetrix, Illumina [2253077] (imputed) |
| CNV | N |
| Mapped trait | nitric oxide exhalation measurement |
| Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005536 |
| Study accession | GCST002304 |
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and Xi'an University of Technology ©2014-2017 All Rights Reserved.
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