Human SNP ID | rs2011905 |
---|---|
Human chromosome | chr15 |
Human SNP position | 86510615 |
Pig chromosome | chr1 |
Pig SNP position | 214718038 |
PubMed ID | 21993531 |
---|---|
Journal | Genes Immun |
Link | www.ncbi.nlm.nih.gov/pubmed/21993531 |
Study | Genome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response. |
Disease/Trait | Cytomegalovirus antibody response |
Initial sample | 1,485 European ancestry sero-postitive individuals, 648 European ancestry sero-negative individuals |
Replication sample | NA |
Region | 15q25.3 |
Chromosome id | chr15 |
Chromosome position | 86510615 |
Reported gene | AGBL1 |
Mapped gene | AGBL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 123624 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2011905-C |
SNPs | rs2011905 |
Merged | 0 |
SNP id current | 2011905 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.37 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.222 |
%95 Ci | [0.13-0.31] unit increase |
Platform | Illumina [546677] |
CNV | N |
Mapped trait | response to virus |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0009615 |
Study accession | GCST001272 |