SNP Detail For rs2011905
1.Mapping Information
Human SNP ID rs2011905
Human chromosome chr15
Human SNP position 86510615
Pig chromosome chr1
Pig SNP position 214718038
2.Annotation Information
PubMed ID21993531
JournalGenes Immun
Linkwww.ncbi.nlm.nih.gov/pubmed/21993531
StudyGenome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response.
Disease/TraitCytomegalovirus antibody response
Initial sample1,485 European ancestry sero-postitive individuals, 648 European ancestry sero-negative individuals
Replication sampleNA
Region15q25.3
Chromosome idchr15
Chromosome position86510615
Reported geneAGBL1
Mapped geneAGBL1
Upstream gene id
Downstream gene id
SNP gene ids123624
Upstream gene distance
Downstream gene distance
SNP risk allelers2011905-C
SNPsrs2011905
Merged0
SNP id current2011905
Contextintron_variant
Intergenic0
Allele frequency0.37
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.222
%95 Ci[0.13-0.31] unit increase
PlatformIllumina [546677]
CNVN
Mapped traitresponse to virus
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009615
Study accessionGCST001272