SNP Detail For rs2011013
1.Mapping Information
Human SNP ID rs2011013
Human chromosome chr15
Human SNP position 83957014
Pig chromosome chr7
Pig SNP position 56582587
2.Annotation Information
PubMed ID25865494
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25865494
StudyGenome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development.
Disease/TraitSitting height ratio
Initial sample3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men
Replication sampleNA
Region15q25.2
Chromosome idchr15
Chromosome position83957014
Reported geneNR
Mapped geneADAMTSL3
Upstream gene id
Downstream gene id
SNP gene ids57188
Upstream gene distance
Downstream gene distance
SNP risk allelers2011013-A
SNPsrs2011013
Merged0
SNP id current2011013
Contextintron_variant
Intergenic0
Allele frequency0.731
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta0.051
%95 Ci[0.029-0.073] unit decrease
PlatformAffymetrix, Illumina [up to 10250422] (imputed)
CNVN
Mapped traitsitting height ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007118
Study accessionGCST002843