Human SNP ID | rs1995809 |
---|---|
Human chromosome | chr4 |
Human SNP position | 146923272 |
Pig chromosome | chr8 |
Pig SNP position | 86914147 |
PubMed ID | 24535457 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24535457 |
Study | A genome-wide association meta-analysis of plasma Aβ peptides concentrations in the elderly. |
Disease/Trait | Plasma amyloid beta peptide concentrations (ABx-40) |
Initial sample | 3,528 European ancestry individuals |
Replication sample | NA |
Region | 4q31.22 |
Chromosome id | chr4 |
Chromosome position | 146923272 |
Reported gene | TTC29 |
Mapped gene | TTC29 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 83894 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1995809-G |
SNPs | rs1995809 |
Merged | 0 |
SNP id current | 1995809 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.054 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.22 |
%95 Ci | [0.12-0.32] unit increase |
Platform | Illumina [2316178] (imputed) |
CNV | N |
Mapped trait | plasma beta-amyloid 1-40 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005659 |
Study accession | GCST002360 |