SNP Detail For rs199515
1.Mapping Information
Human SNP ID rs199515
Human chromosome chr17
Human SNP position 46779275
Pig chromosome JH118614-1
Pig SNP position 86099
2.Annotation Information
PubMed ID22451204
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/22451204
StudyMeta-analysis of Parkinson__s disease: identification of a novel locus, RIT2.
Disease/TraitParkinson__s disease
Initial sample4,238 European ancestry cases, 4,239 European ancestry controls
Replication sample3,738 European ancestry cases, 2,111 European ancestry controls
Region17q21.31
Chromosome idchr17
Chromosome position46779275
Reported geneWNT3
Mapped geneWNT3
Upstream gene id
Downstream gene id
SNP gene ids7473
Upstream gene distance
Downstream gene distance
SNP risk allelers199515-?
SNPsrs199515
Merged0
SNP id current199515
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000000000003
Pvalue mlog16.5228787452803
P value text
Or beta1.32
%95 Ci[NR]
PlatformIllumina [2500000] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001430