Human SNP ID | rs1993293 |
---|---|
Human chromosome | chr15 |
Human SNP position | 99757458 |
Pig chromosome | chr11 |
Pig SNP position | 67728180 |
PubMed ID | 23870195 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23870195 |
Study | Genetics of coronary artery calcification among African Americans, a meta-analysis. |
Disease/Trait | Coronary artery calcification |
Initial sample | 5,823 African American individuals |
Replication sample | 9,992 European ancestry individuals |
Region | 15q26.3 |
Chromosome id | chr15 |
Chromosome position | 99757458 |
Reported gene | LYSMD4 |
Mapped gene | LOC105371020 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371020 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1993293-A |
SNPs | rs1993293 |
Merged | 0 |
SNP id current | 1993293 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.73 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (AA) |
Or beta | 0.17 |
%95 Ci | [0.092-0.248] unit increase |
Platform | Affymetrix, Illumina [up to 2727966] (imputed) |
CNV | N |
Mapped trait | coronary artery calcification |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004723 |
Study accession | GCST002097 |