SNP Detail For rs199307
1.Mapping Information
Human SNP ID rs199307
Human chromosome chr20
Human SNP position 15196934
Pig chromosome chr17
Pig SNP position 26930066
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position15196934
Reported geneMACROD2
Mapped geneMACROD2
Upstream gene id
Downstream gene id
SNP gene ids140733
Upstream gene distance
Downstream gene distance
SNP risk allelers199307-G
SNPsrs199307
Merged0
SNP id current199307
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.241
P value0.000008
Pvalue mlog5.09691001300805
P value text(IGF1 free )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitIGF-1 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004627
Study accessionGCST001762