SNP Detail For rs1987842
1.Mapping Information
Human SNP ID rs1987842
Human chromosome chr2
Human SNP position 234019873
Pig chromosome chr15
Pig SNP position 148702909
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region2q37.1
Chromosome idchr2
Chromosome position234019873
Reported geneTRPM8
Mapped geneTRPM8 - SPP2
Upstream gene id79054
Downstream gene id6694
SNP gene ids
Upstream gene distance351
Downstream gene distance30817
SNP risk allelers1987842-?
SNPsrs1987842
Merged0
SNP id current1987842
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337