Human SNP ID | rs1984119 |
---|---|
Human chromosome | chr9 |
Human SNP position | 95606479 |
Pig chromosome | chr10 |
Pig SNP position | 30728471 |
PubMed ID | 25281659 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25281659 |
Study | A novel common variant in DCST2 is associated with length in early life and height in adulthood. |
Disease/Trait | Infant length |
Initial sample | 28,238 European ancestry individuals |
Replication sample | NA |
Region | 9q22.32 |
Chromosome id | chr9 |
Chromosome position | 95606479 |
Reported gene | PTCH1 |
Mapped gene | LOC105376158 - LOC105376161 |
Upstream gene id | 105376158 |
Downstream gene id | 105376161 |
SNP gene ids | |
Upstream gene distance | 2511 |
Downstream gene distance | 158443 |
SNP risk allele | rs1984119-C |
SNPs | rs1984119 |
Merged | 0 |
SNP id current | 1984119 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.26 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | |
Or beta | 0.063 |
%95 Ci | [0.043-0.083] unit decrease |
Platform | Affymetrix, Illumina [2193675] (imputed) |
CNV | N |
Mapped trait | infant body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006785 |
Study accession | GCST002646 |