SNP Detail For rs1984119
1.Mapping Information
Human SNP ID rs1984119
Human chromosome chr9
Human SNP position 95606479
Pig chromosome chr10
Pig SNP position 30728471
2.Annotation Information
PubMed ID25281659
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25281659
StudyA novel common variant in DCST2 is associated with length in early life and height in adulthood.
Disease/TraitInfant length
Initial sample28,238 European ancestry individuals
Replication sampleNA
Region9q22.32
Chromosome idchr9
Chromosome position95606479
Reported genePTCH1
Mapped geneLOC105376158 - LOC105376161
Upstream gene id105376158
Downstream gene id105376161
SNP gene ids
Upstream gene distance2511
Downstream gene distance158443
SNP risk allelers1984119-C
SNPsrs1984119
Merged0
SNP id current1984119
Contextupstream_gene_variant
Intergenic1
Allele frequency0.26
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta0.063
%95 Ci[0.043-0.083] unit decrease
PlatformAffymetrix, Illumina [2193675] (imputed)
CNVN
Mapped traitinfant body height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006785
Study accessionGCST002646