Human SNP ID | rs1981997 |
---|---|
Human chromosome | chr17 |
Human SNP position | 45979401 |
Pig chromosome | chr12 |
Pig SNP position | 17161884 |
PubMed ID | 23583980 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23583980 |
Study | Genome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis. |
Disease/Trait | Interstitial lung disease |
Initial sample | 1,161 European ancestry cases, 4,683 European ancestry controls |
Replication sample | 876 European ancestry cases, 1,890 European ancestry controls |
Region | 17q21.31 |
Chromosome id | chr17 |
Chromosome position | 45979401 |
Reported gene | MAPT |
Mapped gene | MAPT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4137 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1981997-G |
SNPs | rs1981997 |
Merged | 0 |
SNP id current | 1981997 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.77 |
P value | 0.00000000000009 |
Pvalue mlog | 13.0457574905606 |
P value text | |
Or beta | 1.41 |
%95 Ci | [1.28-1.56] |
Platform | Illumina [439828] |
CNV | N |
Mapped trait | interstitial lung disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004244 |
Study accession | GCST001968 |