SNP Detail For rs1981483
1.Mapping Information
Human SNP ID rs1981483
Human chromosome chr16
Human SNP position 580665
Pig chromosome chr3
Pig SNP position 41270898
2.Annotation Information
PubMed ID22993228
JournalAnn Rheum Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/22993228
StudyNovel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects.
Disease/TraitDisc degeneration (lumbar)
Initial sample4,683 European ancestry individuals
Replication sampleNA
Region16p13.3
Chromosome idchr16
Chromosome position580665
Reported genePIGQ
Mapped genePIGQ
Upstream gene id
Downstream gene id
SNP gene ids9091
Upstream gene distance
Downstream gene distance
SNP risk allelers1981483-A
SNPsrs1981483
Merged0
SNP id current1981483
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.42
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.11
%95 Ci[0.065-0.155] unit increase
PlatformAffymetrix, Illumina [2552511] (imputed)
CNVN
Mapped traitlumbar disc degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004994
Study accessionGCST001687