Human SNP ID | rs1978648 |
---|---|
Human chromosome | chr2 |
Human SNP position | 43144403 |
Pig chromosome | chr3 |
Pig SNP position | 103330466 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 2p21 |
Chromosome id | chr2 |
Chromosome position | 43144403 |
Reported gene | HAAO, ZFP36L2, THADA |
Mapped gene | LOC100506047 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100506047 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1978648? |
SNPs | rs1978648 |
Merged | 0 |
SNP id current | 1978648 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (SI) |
Or beta | 0.2 |
%95 Ci | [0.082-0.318] unit increase |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | insulin sensitivity measurement, glucose homeostasis measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004471, http://www.ebi.ac.uk/efo/EFO_0006896 |
Study accession | GCST002726 |