SNP Detail For rs1975991
1.Mapping Information
Human SNP ID rs1975991
Human chromosome chr3
Human SNP position 188227136
Pig chromosome chr13
Pig SNP position 134960081
2.Annotation Information
PubMed ID23218918
JournalPsychiatry Res
Linkwww.ncbi.nlm.nih.gov/pubmed/23218918
StudyWhite matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder.
Disease/TraitWhite matter integrity (interaction)
Initial sample70 unaffected relatives of cases with bipolar disorder, 80 controls
Replication sampleNA
Region3q28
Chromosome idchr3
Chromosome position188227136
Reported geneLPP
Mapped geneLPP
Upstream gene id
Downstream gene id
SNP gene ids4026
Upstream gene distance
Downstream gene distance
SNP risk allelers1975991-?
SNPsrs1975991
Merged0
SNP id current1975991
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta
%95 Ci
PlatformIllumina [565404]
CNVN
Mapped traitwhite matter integrity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004641
Study accessionGCST001764