Human SNP ID | rs1975991 |
---|---|
Human chromosome | chr3 |
Human SNP position | 188227136 |
Pig chromosome | chr13 |
Pig SNP position | 134960081 |
PubMed ID | 23218918 |
---|---|
Journal | Psychiatry Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23218918 |
Study | White matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder. |
Disease/Trait | White matter integrity (interaction) |
Initial sample | 70 unaffected relatives of cases with bipolar disorder, 80 controls |
Replication sample | NA |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 188227136 |
Reported gene | LPP |
Mapped gene | LPP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4026 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1975991-? |
SNPs | rs1975991 |
Merged | 0 |
SNP id current | 1975991 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.32 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [565404] |
CNV | N |
Mapped trait | white matter integrity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004641 |
Study accession | GCST001764 |