Human SNP ID | rs1972809 |
---|---|
Human chromosome | chrX |
Human SNP position | 120733621 |
Pig chromosome | chr7 |
Pig SNP position | 124011607 |
PubMed ID | 22808956 |
---|---|
Journal | N Engl J Med |
Link | www.ncbi.nlm.nih.gov/pubmed/22808956 |
Study | Genetically distinct subsets within ANCA-associated vasculitis. |
Disease/Trait | Antineutrophil cytoplasmic antibody-associated vasculitis |
Initial sample | 914 European ancestry cases, 5,259 European ancestry controls |
Replication sample | 1,454 European ancestry cases, 1,666 European ancestry controls |
Region | Xq24 |
Chromosome id | chrX |
Chromosome position | 120733621 |
Reported gene | intergenic |
Mapped gene | LOC100128546 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100128546 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1972809-? |
SNPs | rs1972809 |
Merged | 0 |
SNP id current | 1972809 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 1E-24 |
Pvalue mlog | 24 |
P value text | |
Or beta | 1.28 |
%95 Ci | [NR] |
Platform | Affymetrix [NR] |
CNV | N |
Mapped trait | anti-neutrophil antibody associated vasculitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004826 |
Study accession | GCST001613 |