Human SNP ID | rs1959536 |
---|---|
Human chromosome | chr14 |
Human SNP position | 50980053 |
Pig chromosome | chr1 |
Pig SNP position | 201015579 |
PubMed ID | 24132900 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24132900 |
Study | Genome-wide association study of atypical psychosis. |
Disease/Trait | Psychosis (atypical) |
Initial sample | 47 Japanese ancestry cases, 882 Japanese ancestry controls |
Replication sample | NA |
Region | 14q22.1 |
Chromosome id | chr14 |
Chromosome position | 50980053 |
Reported gene | PYGL, TRIM9 |
Mapped gene | TRIM9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 114088 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1959536-? |
SNPs | rs1959536 |
Merged | 0 |
SNP id current | 1959536 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [545513] |
CNV | N |
Mapped trait | psychosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005407 |
Study accession | GCST002211 |