SNP Detail For rs1959536
1.Mapping Information
Human SNP ID rs1959536
Human chromosome chr14
Human SNP position 50980053
Pig chromosome chr1
Pig SNP position 201015579
2.Annotation Information
PubMed ID24132900
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24132900
StudyGenome-wide association study of atypical psychosis.
Disease/TraitPsychosis (atypical)
Initial sample47 Japanese ancestry cases, 882 Japanese ancestry controls
Replication sampleNA
Region14q22.1
Chromosome idchr14
Chromosome position50980053
Reported genePYGL, TRIM9
Mapped geneTRIM9
Upstream gene id
Downstream gene id
SNP gene ids114088
Upstream gene distance
Downstream gene distance
SNP risk allelers1959536-?
SNPsrs1959536
Merged0
SNP id current1959536
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix [545513]
CNVN
Mapped traitpsychosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005407
Study accessionGCST002211