SNP Detail For rs1944766
1.Mapping Information
Human SNP ID rs1944766
Human chromosome chr9
Human SNP position 18215282
Pig chromosome chr1
Pig SNP position 228202114
2.Annotation Information
PubMed ID21897333
JournalPharmacogenet Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/21897333
StudyGenes linked to energy metabolism and immunoregulatory mechanisms are associated with subcutaneous adipose tissue distribution in HIV-infected men.
Disease/TraitFat distribution (HIV)
Initial sample192 European ancestry male cases
Replication sampleNA
Region9p22.2
Chromosome idchr9
Chromosome position18215282
Reported geneADAMTSL1
Mapped geneADAMTSL1
Upstream gene id
Downstream gene id
SNP gene ids92949
Upstream gene distance
Downstream gene distance
SNP risk allelers1944766-C
SNPsrs1944766
Merged0
SNP id current1944766
Contextintron_variant
Intergenic0
Allele frequency0.44
P value0.000003
Pvalue mlog5.52287874528033
P value text(univariate, upper trunk)
Or beta
%95 Ci
PlatformIllumina [319818]
CNVN
Mapped traitHIV-1 infection, body fat distribution
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180, http://www.ebi.ac.uk/efo/EFO_0004341
Study accessionGCST001343