SNP Detail For rs1943345
1.Mapping Information
Human SNP ID rs1943345
Human chromosome chr11
Human SNP position 83165228
Pig chromosome chr9
Pig SNP position 19219618
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region11q14.1
Chromosome idchr11
Chromosome position83165228
Reported genePCF11
Mapped genePCF11
Upstream gene id
Downstream gene id
SNP gene ids51585
Upstream gene distance
Downstream gene distance
SNP risk allelers1943345-C
SNPsrs1943345
Merged0
SNP id current1943345
Contextintron_variant
Intergenic0
Allele frequency0.239
P value0.000007
Pvalue mlog5.15490195998574
P value text(Moderate activity )
Or beta0.03
%95 Ci[NR] %awake time increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762