Human SNP ID | rs1941184 |
---|---|
Human chromosome | chr18 |
Human SNP position | 31458160 |
Pig chromosome | chr6 |
Pig SNP position | 107990175 |
PubMed ID | 19772629 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19772629 |
Study | Genomewide association study for onset age in Parkinson disease. |
Disease/Trait | Parkinson__s disease (age of onset) |
Initial sample | 857 European ancestry familial cases, 440 idiopathic cases |
Replication sample | 747 European ancestry idiopathic cases |
Region | 18q12.1 |
Chromosome id | chr18 |
Chromosome position | 31458160 |
Reported gene | DSG3 |
Mapped gene | DSG3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1830 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1941184-C |
SNPs | rs1941184 |
Merged | 0 |
SNP id current | 1941184 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 2.28 |
%95 Ci | [NR] years decrease |
Platform | Illumina, Perlegen [1861750] (imputed) |
CNV | N |
Mapped trait | Parkinson__s disease, age at onset |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508, http://www.ebi.ac.uk/efo/EFO_0004847 |
Study accession | GCST000490 |