Human SNP ID | rs194045 |
---|---|
Human chromosome | chr16 |
Human SNP position | 29234781 |
Pig chromosome | chr6 |
Pig SNP position | 1639967 |
PubMed ID | 26169365 |
---|---|
Journal | BMC Complement Altern Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26169365 |
Study | Susceptible gene of stasis-stagnation constitution from genome-wide association study related to cardiovascular disturbance and possible regulated traditional Chinese medicine. |
Disease/Trait | Yu-Zhi constitution type in type 2 diabetes |
Initial sample | 539 non-aboriginal Taiwanese ancestry low Yu-Zhi score individuals, 408 non-aboriginal Taiwanese ancestry high Yu-Zhi score individuals |
Replication sample | NA |
Region | 16p11.2 |
Chromosome id | chr16 |
Chromosome position | 29234781 |
Reported gene | Intergenic |
Mapped gene | LOC102723708 - LOC105371159 |
Upstream gene id | 102723708 |
Downstream gene id | 105371159 |
SNP gene ids | |
Upstream gene distance | 2994 |
Downstream gene distance | 57105 |
SNP risk allele | rs194045-G |
SNPs | rs194045 |
Merged | |
SNP id current | 194045 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.888 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Trend model) |
Or beta | 2.13 |
%95 Ci | [1.51-3.02] |
Platform | Illumina [508761] |
CNV | N |
Mapped trait | Yu-Zhi constitution type, type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007638, http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST003026 |