SNP Detail For rs194045
1.Mapping Information
Human SNP ID rs194045
Human chromosome chr16
Human SNP position 29234781
Pig chromosome chr6
Pig SNP position 1639967
2.Annotation Information
PubMed ID26169365
JournalBMC Complement Altern Med
Linkwww.ncbi.nlm.nih.gov/pubmed/26169365
StudySusceptible gene of stasis-stagnation constitution from genome-wide association study related to cardiovascular disturbance and possible regulated traditional Chinese medicine.
Disease/TraitYu-Zhi constitution type in type 2 diabetes
Initial sample539 non-aboriginal Taiwanese ancestry low Yu-Zhi score individuals, 408 non-aboriginal Taiwanese ancestry high Yu-Zhi score individuals
Replication sampleNA
Region16p11.2
Chromosome idchr16
Chromosome position29234781
Reported geneIntergenic
Mapped geneLOC102723708 - LOC105371159
Upstream gene id102723708
Downstream gene id105371159
SNP gene ids
Upstream gene distance2994
Downstream gene distance57105
SNP risk allelers194045-G
SNPsrs194045
Merged
SNP id current194045
Contextintergenic_variant
Intergenic1
Allele frequency0.888
P value0.000006
Pvalue mlog5.22184874961635
P value text(Trend model)
Or beta2.13
%95 Ci[1.51-3.02]
PlatformIllumina [508761]
CNVN
Mapped traitYu-Zhi constitution type, type II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007638, http://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST003026