SNP Detail For rs1927702
1.Mapping Information
Human SNP ID rs1927702
Human chromosome chr9
Human SNP position 15986718
Pig chromosome chr1
Pig SNP position 230561305
2.Annotation Information
PubMed ID19851299
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/19851299
StudyLinkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
Disease/TraitBody mass index
Initial sample1,079 South Tyrolian individuals, 790 Dutch founder individuals, 2,060 European ancestry individuals
Replication sampleNA
Region9p22.3
Chromosome idchr9
Chromosome position15986718
Reported geneNR
Mapped geneCCDC171 - C9orf92
Upstream gene id203238
Downstream gene id100129385
SNP gene ids
Upstream gene distance14819
Downstream gene distance217217
SNP risk allelers1927702-G
SNPsrs1927702
Merged0
SNP id current1927702
Contextintron_variant
Intergenic1
Allele frequency0.42
P value0.000006
Pvalue mlog5.22184874961635
P value text(females)
Or beta0.08
%95 Ci[NR] kg increase
PlatformIllumina [318237]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST000512