SNP Detail For rs1927457
1.Mapping Information
Human SNP ID rs1927457
Human chromosome chr10
Human SNP position 29719734
Pig chromosome chr10
Pig SNP position 45686176
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitNormalized brain volume
Initial sample753 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region10p11.23
Chromosome idchr10
Chromosome position29719734
Reported geneSVIL
Mapped geneSVIL
Upstream gene id
Downstream gene id
SNP gene ids6840
Upstream gene distance
Downstream gene distance
SNP risk allelers1927457-?
SNPsrs1927457
Merged0
SNP id current1927457
Contextintron_variant
Intergenic0
Allele frequency0.31
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000268