Human SNP ID | rs1920975 |
---|---|
Human chromosome | chr4 |
Human SNP position | 177556298 |
Pig chromosome | chr15 |
Pig SNP position | 45810895 |
PubMed ID | 25644384 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25644384 |
Study | Genetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53鈥?49). |
Disease/Trait | Cognitive function |
Initial sample | 51,719 European ancestry individuals 1,473 Erasmus Rupchen Family individuals, 327 Korculan individuals, 430 Orcadian individuals |
Replication sample | NA |
Region | 4q34.3 |
Chromosome id | chr4 |
Chromosome position | 177556298 |
Reported gene | intergenic |
Mapped gene | LOC285500 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 285500 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1920975-? |
SNPs | rs1920975 |
Merged | 0 |
SNP id current | 1920975 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.0254 |
%95 Ci | [0.015-0.036] unit decrease |
Platform | Affymetrix, Illumina [2478500] (imputed) |
CNV | N |
Mapped trait | cognition |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003925 |
Study accession | GCST002774 |