SNP Detail For rs1920975
1.Mapping Information
Human SNP ID rs1920975
Human chromosome chr4
Human SNP position 177556298
Pig chromosome chr15
Pig SNP position 45810895
2.Annotation Information
PubMed ID25644384
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25644384
StudyGenetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53鈥?49).
Disease/TraitCognitive function
Initial sample51,719 European ancestry individuals 1,473 Erasmus Rupchen Family individuals, 327 Korculan individuals, 430 Orcadian individuals
Replication sampleNA
Region4q34.3
Chromosome idchr4
Chromosome position177556298
Reported geneintergenic
Mapped geneLOC285500
Upstream gene id
Downstream gene id
SNP gene ids285500
Upstream gene distance
Downstream gene distance
SNP risk allelers1920975-?
SNPsrs1920975
Merged0
SNP id current1920975
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.0254
%95 Ci[0.015-0.036] unit decrease
PlatformAffymetrix, Illumina [2478500] (imputed)
CNVN
Mapped traitcognition
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003925
Study accessionGCST002774