SNP Detail For rs1915279
1.Mapping Information
Human SNP ID rs1915279
Human chromosome chr1
Human SNP position 238912414
Pig chromosome chr14
Pig SNP position 56545106
2.Annotation Information
PubMed ID22310353
JournalPharmacogenomics J
Linkwww.ncbi.nlm.nih.gov/pubmed/22310353
StudyBeyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis.
Disease/TraitTreatment response for severe sepsis
Initial sample1,446 individuals
Replication sampleNA
Region1q43
Chromosome idchr1
Chromosome position238912414
Reported geneKRT18P32
Mapped geneLOC105373222 - RPL39P10
Upstream gene id105373222
Downstream gene id100129952
SNP gene ids
Upstream gene distance64355
Downstream gene distance140157
SNP risk allelers1915279-?
SNPsrs1915279
Merged0
SNP id current1915279
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(GG vs. not GG)
Or beta
%95 Ci
PlatformIllumina [856627]
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001402