Human SNP ID | rs191493117 |
---|---|
Human chromosome | chr4 |
Human SNP position | 146438979 |
Pig chromosome | chr8 |
Pig SNP position | 87494035 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Serum dimethylarginine levels (asymmetric/symetric ratio) |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 4q31.22 |
Chromosome id | chr4 |
Chromosome position | 146438979 |
Reported gene | NR |
Mapped gene | SLC10A7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84068 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs191493117-C |
SNPs | rs191493117 |
Merged | 0 |
SNP id current | 191493117 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.998 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 2.057 |
%95 Ci | [1.2-2.92] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002242 |