Human SNP ID | rs191241826 |
---|---|
Human chromosome | chr17 |
Human SNP position | 40797075 |
Pig chromosome | chr12 |
Pig SNP position | 21825186 |
PubMed ID | 26252872 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26252872 |
Study | Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level. |
Disease/Trait | Cognitive decline rate in late mild cognitive impairment |
Initial sample | 472 European ancestry cases, 47 cases |
Replication sample | NA |
Region | 17q21.2 |
Chromosome id | chr17 |
Chromosome position | 40797075 |
Reported gene | KRT28 |
Mapped gene | KRT28 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 162605 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs191241826-C |
SNPs | rs191241826 |
Merged | |
SNP id current | 191241826 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.01 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (EA) |
Or beta | 0.4843 |
%95 Ci | [0.29-0.68] unit increase |
Platform | Illumina [~ 9000000] (imputed) |
CNV | N |
Mapped trait | cognitive impairment, cognitive decline measurement |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0100543, http://www.ebi.ac.uk/efo/EFO_0007710 |
Study accession | GCST003075 |