SNP Detail For rs1906060
1.Mapping Information
Human SNP ID rs1906060
Human chromosome chr16
Human SNP position 6058429
Pig chromosome chr3
Pig SNP position 37483010
2.Annotation Information
PubMed ID24002674
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24002674
StudyGenome-wide association study and meta-analysis of intraocular pressure.
Disease/TraitIntraocular pressure
Initial sample2,847 European ancestry primary open angle glaucoma cases, 3,389 European ancestry controls
Replication sampleNA
Region16p13.3
Chromosome idchr16
Chromosome position6058429
Reported geneA2BP1
Mapped geneRBFOX1
Upstream gene id
Downstream gene id
SNP gene ids54715
Upstream gene distance
Downstream gene distance
SNP risk allelers1906060-G
SNPsrs1906060
Merged0
SNP id current1906060
Contextintron_variant
Intergenic0
Allele frequency0.2
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.59
%95 Ci[0.24-0.94] mmHg increase
PlatformIllumina [466573]
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002168