SNP Detail For rs1902618
1.Mapping Information
Human SNP ID rs1902618
Human chromosome chr15
Human SNP position 60872000
Pig chromosome chr1
Pig SNP position 122772353
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region15q22.2
Chromosome idchr15
Chromosome position60872000
Reported geneRORA
Mapped geneLOC102724802, RORA
Upstream gene id
Downstream gene id
SNP gene ids102724802, 6095
Upstream gene distance
Downstream gene distance
SNP risk allelers1902618-?
SNPsrs1902618
Merged0
SNP id current1902618
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(FEV1 decline in asthmatics)
Or beta0.2202
%95 Ci[0.13-0.31] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitforced expiratory volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314
Study accessionGCST001444