SNP Detail For rs190027738
1.Mapping Information
Human SNP ID rs190027738
Human chromosome chr6
Human SNP position 38150966
Pig chromosome chr7
Pig SNP position 38939486
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region6p21.2
Chromosome idchr6
Chromosome position38150966
Reported geneZFAND3
Mapped geneZFAND3
Upstream gene id
Downstream gene id
SNP gene ids60685
Upstream gene distance
Downstream gene distance
SNP risk allelers190027738-A
SNPsrs190027738
Merged0
SNP id current190027738
Contextintron_variant
Intergenic0
Allele frequency0.997
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.216
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264