Human SNP ID | rs1898671 |
---|---|
Human chromosome | chr5 |
Human SNP position | 111072304 |
Pig chromosome | chr2 |
Pig SNP position | 120319779 |
PubMed ID | 22036096 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22036096 |
Study | A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order. |
Disease/Trait | Allergic rhinitis |
Initial sample | 3,933 European ancestry cases, 8,965 European ancestry controls |
Replication sample | NA |
Region | 5q22.1 |
Chromosome id | chr5 |
Chromosome position | 111072304 |
Reported gene | TSLP |
Mapped gene | TSLP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 85480 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1898671-T |
SNPs | rs1898671 |
Merged | 0 |
SNP id current | 1898671 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.35 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.08-1.22] |
Platform | Affymetrix, Illumina [2217510] (imputed) |
CNV | N |
Mapped trait | seasonal allergic rhinitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003956 |
Study accession | GCST001310 |