SNP Detail For rs1898111
1.Mapping Information
Human SNP ID rs1898111
Human chromosome chr15
Human SNP position 47600101
Pig chromosome chr1
Pig SNP position 138233645
2.Annotation Information
PubMed ID22911880
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22911880
StudyGenome-wide association analysis of eating disorder-related symptoms, behaviors, and personality traits.
Disease/TraitEating disorders
Initial sampleUp to 2,567 European ancestry individuals
Replication sampleUp to 767 European ancestry cases, up to 486 European ancestry controls
Region15q21.1
Chromosome idchr15
Chromosome position47600101
Reported geneSEMA6D
Mapped geneLOC105370804, SEMA6D
Upstream gene id
Downstream gene id
SNP gene ids105370804, 80031
Upstream gene distance
Downstream gene distance
SNP risk allelers1898111-A
SNPsrs1898111
Merged0
SNP id current1898111
Contextintron_variant
Intergenic0
Allele frequency0.837
P value0.000008
Pvalue mlog5.09691001300805
P value text(OCPD)
Or beta1.15
%95 Ci[1.08-1.22]
PlatformIllumina [283744]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST001644