SNP Detail For rs1897031
1.Mapping Information
Human SNP ID rs1897031
Human chromosome chr15
Human SNP position 54049268
Pig chromosome chr13
Pig SNP position 108491385
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region15q21.3
Chromosome idchr15
Chromosome position54049268
Reported geneUNC13C
Mapped geneUNC13C
Upstream gene id
Downstream gene id
SNP gene ids440279
Upstream gene distance
Downstream gene distance
SNP risk allelers1897031-?
SNPsrs1897031
Merged0
SNP id current1897031
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.1753
P value0.000001
Pvalue mlog6
P value text(PRM)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477