SNP Detail For rs1895518
1.Mapping Information
Human SNP ID rs1895518
Human chromosome chr16
Human SNP position 64870819
Pig chromosome chr6
Pig SNP position 23643210
2.Annotation Information
PubMed ID25378659
JournalJ Lipid Res
Linkwww.ncbi.nlm.nih.gov/pubmed/25378659
StudyGenetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids.
Disease/TraitVery long-chain saturated fatty acid levels (fatty acid 20:0)
Initial sample10,129 European ancestry individuals
Replication sampleNA
Region16q21
Chromosome idchr16
Chromosome position64870819
Reported geneCDH11
Mapped geneLOC105371310 - LOC105371313
Upstream gene id105371310
Downstream gene id105371313
SNP gene ids
Upstream gene distance335779
Downstream gene distance33980
SNP risk allelers1895518-T
SNPsrs1895518
Merged0
SNP id current1895518
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta4.623
%95 Ci[NR] Z score decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitvery long-chain saturated fatty acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006796
Study accessionGCST002690