Human SNP ID | rs1895518 |
---|---|
Human chromosome | chr16 |
Human SNP position | 64870819 |
Pig chromosome | chr6 |
Pig SNP position | 23643210 |
PubMed ID | 25378659 |
---|---|
Journal | J Lipid Res |
Link | www.ncbi.nlm.nih.gov/pubmed/25378659 |
Study | Genetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids. |
Disease/Trait | Very long-chain saturated fatty acid levels (fatty acid 20:0) |
Initial sample | 10,129 European ancestry individuals |
Replication sample | NA |
Region | 16q21 |
Chromosome id | chr16 |
Chromosome position | 64870819 |
Reported gene | CDH11 |
Mapped gene | LOC105371310 - LOC105371313 |
Upstream gene id | 105371310 |
Downstream gene id | 105371313 |
SNP gene ids | |
Upstream gene distance | 335779 |
Downstream gene distance | 33980 |
SNP risk allele | rs1895518-T |
SNPs | rs1895518 |
Merged | 0 |
SNP id current | 1895518 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 4.623 |
%95 Ci | [NR] Z score decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | very long-chain saturated fatty acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006796 |
Study accession | GCST002690 |