SNP Detail For rs189256434
1.Mapping Information
Human SNP ID rs189256434
Human chromosome chr19
Human SNP position 40818449
Pig chromosome chr6
Pig SNP position 44701847
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region19q13.2
Chromosome idchr19
Chromosome position40818449
Reported geneIntergenic
Mapped geneCYP2T1P - CYP2F2P
Upstream gene id171523
Downstream gene id171427
SNP gene ids
Upstream gene distance7057
Downstream gene distance28
SNP risk allelers189256434-A
SNPsrs189256434
Merged1
SNP id current3213808
Contextintron_variant
Intergenic1
Allele frequency0.726
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.061
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262